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COSMO 2026.1 documentation

COSMO 2026.1 documentation

Getting started

What COSMO does
How to install
Introduction
How to cite COSMO

Tutorials

COSMO Tutorials

IDP simulation

Simulation control options

Protein synthesis

Protein synthesis: overview
The ribosome structure (get one, or build your own)
Codon dwell-time tables (per-codon timing)
Synthesis through an analytic tunnel (cylinder model)
Synthesis on a coarse-grained ribosome
Resuming long synthesis runs
Visualizing the synthesis process
Synthesis control options

Python & API reference

Parameters
System
Models
cosmo.csp package

Full module index

COSMO
- cosmo package

cosmo.mdrun package¶

Submodules¶

cosmo.mdrun.mdrun module¶

Module contents¶

cosmo.parameters package

cosmo.core package

Copyright © 2022, Quyen Vu

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cosmo.mdrun package