Quyen's Blog

What I have been working on and learned lately

TOPO tutorial

an example of a blog post with some code

14 min read · 2026

a distill-style blog post

an example of a distill-style blog post and main elements

25 min read · 2021

a post with code

an example of a blog post with some code

4 min read · 2015

GLink Entanglement Tutorial

A practical tutorial for detecting, confirming, and clustering Gaussian-linking entanglements in protein structures.

23 min read · May 31, 2026

2026 · protein-entanglement gaussian-linking topology python structural-biology · research-notes
Detecting Mirror Images in Coarse-Grained Simulations

A practical checklist to identify mirror-image structures in CG trajectories.

4 min read · April 23, 2026

2026 · coarse-grained-simulation protein-folding chirality analysis · research-notes
TOPO tutorial

an example of a blog post with some code

14 min read · February 06, 2026

2026 · formatting code · sample-posts
a post with plotly.js

this is what included plotly.js code could look like

2 min read · March 26, 2025

2025 · formatting charts · sample-posts
a post with image galleries

this is what included image galleries could look like

2 min read · December 04, 2024

2024 · formatting images · sample-posts